CDS
| Accession Number | TCMCG007C52262 |
| gbkey | CDS |
| Protein Id | XP_018510370.1 |
| Location | complement(join(3941808..3941973,3942046..3942110,3942193..3942316,3942391..3942584,3944568..3944780,3944871..3944954,3945026..3945196,3945288..3945352,3945654..3945865,3945948..3946060,3946142..3946288,3946356..3946554,3946907..3947082)) |
| Gene | LOC103837366 |
| GeneID | 103837366 |
| Organism | Brassica rapa |
Protein
| Length | 642aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_018654854.2 |
| Definition | histone deacetylase 5 isoform X4 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | B |
| Description | histone deacetylase |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01009 [VIEW IN KEGG] ko03019 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] ko04131 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11407
[VIEW IN KEGG] |
| EC |
3.5.1.98
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko05034
[VIEW IN KEGG] ko05165 [VIEW IN KEGG] ko05203 [VIEW IN KEGG] map05034 [VIEW IN KEGG] map05165 [VIEW IN KEGG] map05203 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGAACATGCCCGAGAAACCTTCCGAATCCAATGGGAAAGTACATCGAAAGGTGGGTCTTGTTTACGACGAGACCATGTGCAAACACGACACACCTGACGGCGAGGCTCACCCTGAGCGTCCCGACCGTATCAGAGTCATCTGGGAGAAGCTTCAGCTCGCCGGAGTCACTCAAAGATGTGTGGTTCTTGGTGGTACCAAAGCAGAAGATGCGCATCTCCAACTGGTTCACACAAAGGACCATGTTAATCTAGTTAAGAGTAGCACAAACAAGAAAGATTATCAGAGTGACAGGGTTGCTTCACTGGTGAATTCGATATATCTTAATGGAAGTACATCTGAAGCTGCATATCTTGCAGCTGGTTCTGTTGTAGAGGTGGCTGAGAAAGTTGCCAAGGGAGAGTTAGACTCTGGATTTGCTATTGTCAGGCCTCCAGGGCACCATGCTGAGGCAGATGAAGCCATGGGGTTCTGTTTTTTCAACAATGTTGCAGTCGCTGCTAGTTATCTACTAGATGAAAGACCTGATCTAGGTGTCAAGAAGATTCTGGTTGTTGATTGGGATGTCCATCACGGAAACGGCACCCAGAAGATGTTCTGGGAAGATCCTCGTGTACTAGTTTTCTCTGTTCATAGGCATGAGGATGGAGGCTTCTATCCAGGGGGTGATGATGGATCATATAACATGGTTGGTGAAGGTCCAGGTGAAGGGTTCAACATAAACGTTCCATGGGAGCAAGGAAGATGTGGAGATGCGGATTATCTTGCTGCTTGGGACCATATCTTGATTCCTGTAGCTAAGGAGTTTAATCCTGATATTATCTTGTTATCAGCTGGCTTTGATGCAGCTATTGGTGATCCACTCGGTGGTTGTCGTGTTACACCATATGGATACTCAGTTATGTTGAAGAAGCTGATGGAGTTTGCACAAGGAAAGATTGTGATGGCATTAGAGGGAGGTTACAATCTTGACTCAATTGCAAAGTCTTCACTTGCTTGTGTCCAAGTTTTGCTTGAAGACAACCCAATTCAAGGTTCTTCTGAAGCAATTCCATTCATGTCCACATGGCGTGTCATACAAGCGGTACGCAAGAGACTATGTGCTTATTGGCCTTCACTTGCAGATGAACTACCATCGAAGCTGACTAATCAGAAAACTCCTACTCCAATTGTCCTTACCTCAAACTCCAACTCTGAAGCCAAAGACAACGCTCATGAACTCCTGGATCAAATGTCAAAACTCAACATTGAAAACCACCAAGGAGATACTAAGGTTTCTAGATCTTGGAGAAGTGATCTTTCAAAGGTTGACGTCTGGTATGCCTCTTTCGGATCCAACATGTGGAAACCAAGGTTCCTTTGCTATATTCAAGGGGGACAAGCGGCAGGAATGAAGAAGGCATGTGTTGGTGCAATGGATAAAACTCCACCAAAGGAAACAACGTGGGGAACGTTTCCAAACAGGCTATTCTTTGGCCGTGAATCTACAGTTACTTGGGGTGAAGGAGGATCTGCTTTCCTCAACCCTCTGACTAATCTCAGTGATCAAACTCACATGTGTTTCTACAGAATCACGCTTGAGCAGTTCAACGATGTTCTGTTTCAGGAAAATGGCATGAAAGTAGATTCTGATACTCCTCTCTTTGATCTAGCGGCTATGCAGTTAGTACAGAACAATGGATCCATTCCACTTGCTAAAGCTGGTTGGTATGGTAACGTTGTCTGTGTGGGAAAAGAATCCGACATACCTATACTTACAATGACTTGCACACTTTCTGTTCTTGAGAAGTTCACATCTGGTGAGGTCCCATTAAGACCTCCTGCAAAAGCCTATGCCAACACTTTGGTGATGGGACTTGTTGAAGGAGGAAGACTCTCTGAAGAAGAAGCTTGGGCTTACATAGACAATGCTGCTTCTAAACCTCTCTAA |
| Protein: MNMPEKPSESNGKVHRKVGLVYDETMCKHDTPDGEAHPERPDRIRVIWEKLQLAGVTQRCVVLGGTKAEDAHLQLVHTKDHVNLVKSSTNKKDYQSDRVASLVNSIYLNGSTSEAAYLAAGSVVEVAEKVAKGELDSGFAIVRPPGHHAEADEAMGFCFFNNVAVAASYLLDERPDLGVKKILVVDWDVHHGNGTQKMFWEDPRVLVFSVHRHEDGGFYPGGDDGSYNMVGEGPGEGFNINVPWEQGRCGDADYLAAWDHILIPVAKEFNPDIILLSAGFDAAIGDPLGGCRVTPYGYSVMLKKLMEFAQGKIVMALEGGYNLDSIAKSSLACVQVLLEDNPIQGSSEAIPFMSTWRVIQAVRKRLCAYWPSLADELPSKLTNQKTPTPIVLTSNSNSEAKDNAHELLDQMSKLNIENHQGDTKVSRSWRSDLSKVDVWYASFGSNMWKPRFLCYIQGGQAAGMKKACVGAMDKTPPKETTWGTFPNRLFFGRESTVTWGEGGSAFLNPLTNLSDQTHMCFYRITLEQFNDVLFQENGMKVDSDTPLFDLAAMQLVQNNGSIPLAKAGWYGNVVCVGKESDIPILTMTCTLSVLEKFTSGEVPLRPPAKAYANTLVMGLVEGGRLSEEEAWAYIDNAASKPL |